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Bioinformatician

10 July 2018

The Role:

The successful applicant will work with a focused team of developers, bioinformaticians and user support personnel on the Accelerating Medicines Partnership - Type 2 Diabetes project . You will help build multi-platform, cloud-friendly pipelines for genetic association studies, and statistical analysis of variation and its effect in type 2 diabetes and associated phenotypes. As part of this project you will have the opportunity to work with national and international collaborators, and to gain expertise in biological and phenotypic ontologies. You will also work with software developers to implement scalable databases and Extract, Transform, and Load (ETL) pipelines for the management, transfer and analysis of human genetic data. You will be expected to travel for meetings and conferences where required.

At EMBL-EBI, we help scientists realise the potential of ‘big data’ in biology by enabling them to exploit complex information to make discoveries that benefit mankind. Working for EMBL-EBI gives you an opportunity to apply your skills and energy for the greater good. As part of the European Molecular Biology Laboratory (EMBL), we are a non-profit, intergovernmental organisation funded by 22 member states and two associate member states and proud to be an equal-opportunity employer. We are located on the Wellcome Genome Campus near Cambridge in the UK, and our 600 staff are engineers, technicians, scientists and other professionals from all over the world.

Qualifications and Experience:

  • You should hold a bachelor's or higher degree in computer science, computational biology or bioinformatics.
  • Relevant experience and skills in computational biology, bioinformatics, or statistics
  • Expertise in one or more of: Java, R, Python
  • Experience of relational databases
  • Strong communication skills and the ability to work effectively with others

The ideal candidate will also have:

  • Previous experience of GWAS
  • Knowledge of Docker containers, virtual machines and cloud environments
  • Experience of international collaborations, clinical and phenotype ontologies / terminology, and working with controlled-access human data
  • Proficient in next-generation sequencing data analysis and variant analysis
  • Experience dealing with real-world data problems such as versioning, ensuring reproducibility and traceability

The ability to work within a team and international consortium is critical to this position, and excellent communication skills and an ability to work to tight deadlines are essential. The bioinformatician will be required to communicate technical documents and take part in the daily scrum with software developers, as well as provide user orientated communication with external and internal users of the systems.


Benefits:

EMBL is an inclusive, equal opportunity employer offering attractive conditions and benefits appropriate to an international research organisation. The remuneration package comprises a competitive salary, a comprehensive pension scheme and health insurance, educational and other family related benefits where applicable, as well as financial support for relocation and installation. 

We have an informal culture, international working environment and excellent professional development opportunities but one of the really amazing things about us is the concentration of technical and scientific expertise – something you probably won’t find anywhere else. 

If you’ve ever visited the campus you’ll have experienced first-hand our friendly, collegial and supportive atmosphere, set in the beautiful Cambridgeshire countryside. Our staff also enjoy excellent sports facilities including a gym, a free shuttle bus, an on-site nursery, cafés and restaurant and a library

Application Instructions:

To apply please submit a covering letter and CV, with two referees, through our online system at http://ig14.i-grasp.com//fe/tpl_embl01.asp?newms=jj&id=56630&aid=15470

Closing Date: 19 August 2018